I am aware that this topic has not been discussed for years but in case there is someone that is struggling with fitting the quarter light glass (as I have been for longer than I care to admit) I should add to the tips already on this forum.
After trying everything is was clear that the seal I have for the 45° angle and the horizonal are just too fat to sit in the aluminium "U" channel to give room for the glass (these are seals from SJSportscars in the UK, a Company for which I have a high regard). To cut to the chase, it was either a case of trying to modify rubber seals or modifying where they fit. My tip is to ease the aluminium channel open with circlip pliers - this allows the rubber seal to sit a bit lower in the "U" and give more space to slide the quarter light glass in place to clear the main frame which contains the sliding galss. I still have to fit the frame with the sliding window so I am not out of the woods. I have read that it is possible to fit the quarter light and seals after the main frame (loosely in place or otherwise) but this option is a mystery to me.
It's a pain. No doubt. Not as bad as some other issues, but a pain nonetheless. I'd invite you to check out the renovation journal for 693R, written in '07-'09, where I detail some of how to put this together.
you're going to want to read the entry for 12/29/08 entitled "On the Downstroke" where I have a few tips about fitting the quarter light/inter-frame H section, and U sections in the main window.
Also, under the photo section for 693R, under the 2008 folder, the sub-folders for 12/29/2008 and 12/30/2008 have installation photos.
One item: the U channel open ends fit UNDER the lip of the aluminum channel. I show a tool to use to put it under the lip. You don't have to bend the channel open. Once you get it installed, you can spray it with silicone spray to get the window to move; as you use it, it will take a set and wear slightly so the windows move nicely. Don't go bending things, the U channels that the usual suspects sell works just fine, if a bit stiff initially. Oh, and don't put the rear vertical channel in all the way or the top horizontal channel until you finish attaching the frame to the door.
All mentioned files and photos are available under the 693R menu tab at
http://www.lotuseuropa.us