My UK TC didn't have relays originally on either the blower or cooling fan. Actually I'm wondering now if there were any at all on the car, I don't think there were ? My fusebox has 4 fuses, if yours has only 2 it sounds like the early ones used on 1960s mini's and also the 60s Elan which only has 2 fuses for all circuits.
Anyway I retained the original 4-fuse box in the cabin but fitted a secondary fuse box fed with an independent ammeter feed plus some relays in the front of the car, mounted against the plenum chamber wall. I've no pictures of the mod, but you can get a feel from the photo of the blower fan installation. I've added the modified wiring diagram as well.
A full upgrade to a modern system of single circuit per fuse is a great idea, and if you're going from scratch then I'd ignore originality and go for it. The electrics are fairly simple on our cars so it wouldn't be a big job.
Brian